Overall Workflow

The systems on the HPCs are all Ubuntuarrow-up-right, which is a Linux operating system. The users should have the basic knowledge about using the Linux system. Information can be found on the Linux Tutorialarrow-up-right page.

To have an overall understanding of how to run jobs on the HPCs, a workflow is shown below:

Step
Work
Reference

1

Connect to HPC

2

Create a work directory of the job under /raid/home/user_name with needed codes and dataset

3

Set up the computing environment (usually by using the Docker container image, Jupyter Notebook can also be used in Docker)

4

Check the status of the HPC to decide the resources for running the job

5

Submit the job (usually with specified GPU or CPU)

6

Monitor the job to avoid invalid runs

7

Backup your data if necessary

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